john hawks weblog

paleoanthropology, genetics and evolution

Bibliography

Found 1307 results
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2005
Takeuchi F, Yanai K, Morii T, Ishinaga Y, Taniguchi-Yanai K, Nagano S, and Kato N. 2005. Linkage Disequilibrium Grouping of SNPs Reflecting Haplotype Phylogeny for Efficient Selection of Tag SNPs. Genetics [Internet] 170:291–304. Available from: http://dx.doi.org/10.1534/genetics.104.038232
Sjödin P, Kaj I, Krone S, Lascoux M, and Nordborg M. 2005. On the Meaning and Existence of an Effective Population Size. Genetics [Internet] 169:1061–1070. Available from: http://dx.doi.org/10.1534/genetics.104.026799
Hammock EAD, and Young LJ. 2005. Microsatellite Instability Generates Diversity in Brain and Sociobehavioral Traits. Science [Internet] 308:1610–1634. Available from: http://dx.doi.org/10.1126/science.1111427
Shea JJ. 2005. The Middle Paleolithic of the Levant: Recursion and Convergence. In: Hovers E, Kuhn SL Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. New York: Springer. p 189–212.
Meignen L, Bar-Yosef O, Speth JD, and Stiner MC. 2005. Middle Paleolithic Settlement Patterns in the Levant. In: Hovers E, Kuhn SL Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. New York: Springer. p 149–170.
Stiner MC. 2005. Middle Paleolithic Subsistence Ecology in the Mediterranean Region. In: Hovers E, Kuhn SL Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. New York: Springer. p 213–232.
Niemi A-K, and Majamaa K. 2005. Mitochondrial DNA and ACTN3 genotypes in Finnish elite endurance and sprint athletes. European Journal of Human Genetics 13:965–969.
Taylor RW, and Turnbull DM. 2005. Mitochondrial DNA Mutations in Human Disease. Nature Reviews Genetics [Internet] 6:389–402. Available from: http://dx.doi.org/10.1038/nrg1606
Lowell BB, and Shulman GI. 2005. Mitochondrial Dysfunction and Type 2 Diabetes. Science 307:384–397.
Wallace DC. 2005. The Mitochondrial Genome in Human Adaptive Radiation and Disease: On the Road to Therapeutics and Performance Enhancement. Gene [Internet] 354:169–180. Available from: http://dx.doi.org/10.1016/j.gene.2005.05.001
Wallace DC. 2005. A Mitochondrial Paradigm of Metabolic and Degenerative Diseases, Aging, and Cancer: A Dawn for Evolutionary Medicine. Annual Review of Genetics [Internet] Reviews in Advance:359–407. Available from: http://dx.doi.org/10.1146/annurev.genet.39.110304.095751
Gardner A, and Boles RG. 2005. Is a ``Mitochondrial Psychiatry'' in the Future? A Review. Current Psychiatry Review [Internet] 1:255–271. Available from: http://dx.doi.org/10.2174/157340005774575064
Meadows JRS, Li K, Kantanen J, Tapio M, Sipos W, Pardeshi V, Gupta V, Calvo JH, Whan V, Norris B, et al. 2005. Mitochondrial Sequence Reveals High Levels of Gene Flow Between Breeds of Domestic Sheep from Asia and Europe. Journal of Heredity [Internet] 96:494–501. Available from: http://dx.doi.org/10.1093/jhered/esi100
Hill RS, and Walsh CA. 2005. Molecular Insights Into Human Brain Evolution. Nature [Internet] 437:64–67. Available from: http://dx.doi.org/10.1038/nature04103
Gaudzinski S. 2005. Monospecific or Species-Dominated Faunal Assemblages During the Middle Paleolithic in Europe. In: Hovers E, Kuhn SL Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. New York: Springer. p 137–148.
Petros JA, Baumann AK, Ruiz-Pesini E, Amin MB, Sun CQ, Hall J, Lim S, Issa MM, Flanders WD, Hosseini SH, et al. 2005. mtDNA Mutations Increase Tumorigenicity in Prostrate Cancer. Proceedings of the National Academy of Sciences, U. S. A. 102:719–724.
Johnson T. 2005. Multipoint Linkage Disequilibrium Mapping Using Multilocus Allele Frequency Data. Annals of Human Genetics [Internet] 69:474–497. Available from: http://dx.doi.org/10.1046/j.1529-8817.2005.00178.x
Kleindienst MR. 2005. On Naming Things: Behavioral Changes in the Later Middle to Earlier Late Pleistocene, Viewed from the Eastern Sahara. In: Hovers E, Kuhn SL Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. New York: Springer. p 13–28.
Lovejoy OC. 2005. The Natural History of Human Gait and Posture. Part 1. Spine and Pelvis. Gait and Posture [Internet] 21:95–112. Available from: http://dx.doi.org/10.1016/j.gaitpost.2004.01.001
Bustamante CD, Fledel-Alon A, Williamson S, Nielsen R, Hubisz MT, Glanowski S, Tanenbaum DM, White TJ, Sninsky JJ, Hernandez RD, et al. 2005. Natural Selection on Protein-Coding Genes in the Human Genome. Nature [Internet] 437:1153–1157. Available from: http://dx.doi.org/10.1038/nature04240
Ahern JCM, Hawks JD, and Lee S-H. 2005. Neandertal taxonomy reconsidered \\dots again: a response to Harvati et al. Journal of Human Evolution 48:647–652.
Sawyer GJ, and Maley B. 2005. Neanderthal Reconstructed. The Anatomical Record [Internet] 283B:23–31. Available from: http://dx.doi.org/10.1002.a.b.20057
Brace LC. 2005. ``Neutral Theory'' and the Dynamics of the Evolution of ``Modern'' Human Morphology. Human Evolution 20:19–38.
Brunet M, Guy F, Pilbeam D, Lieberman DE, Likius A, Mackaye HT, {Ponce de Léon} MS, Zollikofer CPE, and Vignaud P. 2005. New Material of the Earliest Hominid from the Upper Miocene of Chad. Nature 434:752–755.
Fuller BT, Fuller JL, Sage NE, Harris DA, O'Connell TC, and Hedges RE. 2005. Nitrogen Balance and \$\δ\_15\$N}: Why You're Not What You Eat During Nutritional Stress. Rapid Communications in Mass Spectrometry 19:2497–2506.
Hovers E, and Belfer-Cohen A. 2005. ``Now You See It, Now You Don't''–-Modern Human Behavior in the Middle Paleolithic. In: Hovers E, Kuhn SL Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. New York: Springer. p 295–304.
Römpler H, Rohland N, Lalueza-Fox C, Willerslev E, Kuznetsova T, Rabeder G, Bertranpetit J, Schöneberg T, and Hofreiter M. 2005. Nuclear Gene Indicates Coat-Color Polymorphism in Mammoths. Science [Internet] 313:62. Available from: http://dx.doi.org/10.1126/science.1128994
Hey J. 2005. On the Number of New World Founders: A Population Genetic Portrait of the Peopling of the Americas. PLoS Biology 3.
Hockett B, and Haws JA. 2005. Nutritional Ecology and the Human Demography of Neandertal Extinction. Quaternary International 137:21–34.
Clark GA, and Riel-Salvatore J. 2005. Observations on Systematics in Paleolithic Archaeology. In: Hovers E, Kuhn SL Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. New York: Springer. p 29–56.
Mekel-Bobrov N, Gilbert SL, Evans PD, Vallender EJ, Anderson JR, Hudson RR, Tishkoff SA, and Lahn BT. 2005. Ongoing Adaptive Evolution of \\emphASPM, A Brain Size Determinant in \\emphHomo sapiens. Science [Internet] 309:1720–1722. Available from: http://dx.doi.org/10.1126/science.1116815
Cordain L, Eaton BS, Sebastian A, Mann N, Lindeberg S, Watkins BA, O'Keefe JH, and Brand-Miller J. 2005. Origins and Evolution of the Western Diet: Health Implications for the 21st Century. American Journal of Clinical Nutrition 81:341–354.
Petrides M, Cadoret G, and Mackey S. 2005. Orofacial somatomotor responses in the macaque monkey homologue of Broca's area. Nature [Internet] 435:1235–1238. Available from: http://dx.doi.org/10.1038/nature03628
Kosfeld M, Heinrichs M, Zak PJ, Fischbacher U, and Fehr E. 2005. Oxytocin increases trust in humans. Nature [Internet] 435:673–676. Available from: http://dx.doi.org/10.1038/nature03701
Minichillo T. 2005. Paleodemography, Grandmothering, and Modern Human Evolution: A Comment on Caspari and Lee (2004). Journal of Human Evolution [Internet] 49:643–645. Available from: http://dx.doi.org/10.1016/j.jhevol.2005.04.011
McVean G, Spencer CCA, and Chaix R. 2005. Perspectives on Human Genetic Variation from the HapMap Project. PLoS Genetics [Internet] 1. Available from: http://dx.doi.org/10.1371/journal.pgen.0010054
Babik W, Branicki W, Crnobrnja-Isailović J, Gog\v{a}lniceanu D, Sas I, Olgun K, Poyarkov NA, Garcia-Par\'ıs M, and Arntzen JW. 2005. Phylogeography of Two European Newt Species –- Discordance Between mtDNA and Morphology. Molecular Ecology [Internet] 14:2475–2492. Available from: http://dx.doi.org/10.1111/j.1365-294X.2005.02605.x
Kumar S, Filipski A, Swarna V, Walker A, and Hedges BS. 2005. Placing Confidence Limits on the Molecular Age of the Human-Chimpanzee Divergence. Proceedings of the National Academy of Sciences, U. S. A. [Internet] 102:18842–18847. Available from: http://dx.doi.org/10.1073/pnas.0509585102
Zimov SA. 2005. Pleistocene Park: Return of the Mammoth's Ecosystem. Science [Internet] 308:796–798. Available from: http://dx.doi.org/10.1126/science.1113442
{Vander Molen} J, Frisse LM, Fullerton SM, Qian Y, del Bosque-Plata L, Hudson RR, and {Di Rienzo} A. 2005. Population Genetics of \\emphCAPN10 and \\emphGPR35: Implications for the Evolution of Type 2 Diabetes Variants. American Journal of Human Genetics 76:548–560.
Rohland N, Pollack JL, Nagel D, Beauval C, Airvaux J, Pääbo S, and Hofreiter M. 2005. The Population History of Extant and Extinct Hyenas. Molecular Biology and Evolution [Internet] 22:2435–2443. Available from: http://dx.doi.org/10.1093/molbev/msi244
Sampaio DT, and Ferrari SF. 2005. Predation of an Infant Titi Monkey (\\emphCallicebus moloch) by a Tufted Capuchin (\\emphCebus apella). Folia Primatologica [Internet] 76:113–115. Available from: http://dx.doi.org/10.1159/000083617
Schoenemann TP, Sheehan MJ, and Glotzer DL. 2005. Prefrontal White Matter Volume Is Disproportionately Larger in Humans Than in Other Primates. Nature Neuroscience [Internet] 8:242–252. Available from: http://dx.doi.org/10.1038/nn1394
Orr AH. 2005. The Probability of Parallel Evolution. Evolution 59:216–220.
Brooks AS, Yellen JE, Nevell L, and Hartman G. 2005. Projectile Technologies of the African MSA: Implications for Modern Human Origins. In: Hovers E, Kuhn SL Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. Transitions Before the Transition: Evolution and Stability in the {Middle Paleolithic} and {Middle Stone Age}. New York: Springer. p 233–256.
Trueman CNG, Field JH, Dortsch J, Charles B, and Wroe S. 2005. Prolonged Coexistence of Humans and Megafauna in Pleistocene Australia. Proceedings of the National Academy of Sciences, U. S. A. [Internet] 102:8381–8385. Available from: http://dx.doi.org/10.1073/pnas.0408975102
Hlusko LJ. 2005. Protostylid Variation in \\emphAustralopithecus. Journal of Human Evolution [Internet] 46:579–594. Available from: http://dx.doi.org/10.1016/j.jhevol.2004.03.003
Ohman JC, Lovejoy OC, and White TD. 2005. Questions about \\emphOrrorin Femur. Science [Internet] 307:845. Available from: http://dx.doi.org/10.1126/science.307.5711.845b
Gravina B, Mellars P, and Ramsey CB. 2005. Radiocarbon Dating of Interstratified Neanderthal and Early Modern Human Occupations at the Chatelperronian Type Site. Nature [Internet] 438:51–56. Available from: http://dx.doi.org/10.1038/nature04006
Xue Y, Zerjal T, Bao W, Zhu S, Lim S-K, Shu Q, Xu J, Du R, Fu S, Li P, et al. 2005. Recent Spread of a Y-Chromosomal Lineage in Northern China and Mongolia. American Journal of Human Genetics 77:1112–1116.

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About the bibliography

My bibliography database represents years of work by many people. The core of the database was compiled by Milford Wolpoff, with contributions from many students and coauthors. I have added substantially to the database during the last fifteen years, and since I have been blogging all new entries are linked by Digital Object Identifier numbers to their place of publication.

If you find the database useful, please take time to thank the people who worked hard to compile it. I know they will appreciate hearing it.

This database began as a flat text file of bibliographic entries, which I have over the years scripted into a computer-readable format. Many errors have slipped in, including typos from the initial data entry, script fragments from my BibTeX database, and some entries that began in a non-standard format and were scrambled by scripts. Please do not write me expecting that I will fix these errors. It would take me weeks of work to do this. Works will be fixed as I cite them or enter updated information for them.

There are also errors of omission. Most entries are here because they got cited, in Milford's books, in the many research articles by him or his students, or in my work. I mention this mainly because I know that some of you will look up your own names, and find many important papers missing from the database. If you're disappointed in the representation of your articles here, by all means contact me and I will work with you. This database is mirrored on CiteULike and Mendeley and I can import your bibliographic data from these sites, EndNote, BibTeX or other standard formats.

A fuller introduction to the bibliography is in my initial announcement.

Neandertals

For years, I've worked on their bones. Now I'm working on their genes. Read more about the science studying these ancient people.

Denisova

From a finger bone of an ancient human came the record of a completely unexpected population. My lab is working on the science of the Denisova genome.

Acceleration

The advent of agriculture caused natural selection to speed up greatly in humans. We're uncovering some of the ways that populations have rapidly changed during the last 10,000 years.

Malapa

Just outside Johannesburg, the Malapa site is producing some of the most exciting finds in human evolution. This site is the headquarters of the Malapa Soft Tissue Project.