john hawks weblog

paleoanthropology, genetics and evolution

Bibliography

Found 12807 results
2009
Watson KK, Ghodasra JH, and Platt ML. 2009. Serotonin Transporter Genotype Modulates Social Reward and Punishment in Rhesus Macaques. PLoS ONE [Internet] 4:e4156+. Available from: http://dx.doi.org/10.1371/journal.pone.0004156
Dixson AF. 2009. Sexual selection and the origins of human mating systems. Oxford, UK: Oxford University Press.
Churchill SE, Franciscus RG, McKean-Peraza HA, Daniel JA, and Warren BR. 2009. Shanidar 3 Neandertal rib puncture wound and paleolithic weaponry. Journal of Human Evolution [Internet] 57:163–178. Available from: http://dx.doi.org/10.1016/j.jhevol.2009.05.010
Bar-Yosef Mayer DE, Vandermeersch B, and Bar-Yosef O. 2009. Shells and ochre in Middle Paleolithic Qafzeh Cave, Israel: indications for modern behavior. Journal of Human Evolution 56:307 - 314.
Pickrell JK, Coop G, Novembre J, Kudaravalli S, Li JZ, Absher D, Srinivasan BS, Barsh GS, Myers RM, Feldman MW, et al. 2009. Signals of recent positive selection in a worldwide sample of human populations. Genome Research [Internet] 19:826–837. Available from: http://dx.doi.org/10.1101/gr.087577.108
De la Cruz O, Blekhman R, Zhang X, Nicolae D, Firestein S, and Gilad Y. 2009. A signature of evolutionary constraint on a subset of ectopically expressed olfactory receptor genes. Molecular biology and evolution 26:491-4.
Cole SW. 2009. Social Regulation of Human Gene Expression. Current Directions in Psychological Science [Internet] 18:132–137. Available from: http://dx.doi.org/10.1111/j.1467-8721.2009.01623.x
Semaw S, Rogers M, and Stout D. 2009. Sourcebook of Paleolithic TransitionsThe Oldowan-Acheulian Transition: Is there a “Developed Oldowan” Artifact Tradition?. (Camps M, Chauhan P). New York, NY: Springer New York.
Alperson-Afil N, Sharon G, Kislev M, Melamed Y, Zohar I, Ashkenazi S, Rabinovich R, Biton R, Werker E, Hartman G, et al. 2009. Spatial Organization of Hominin Activities at Gesher Benot Ya'aqov, Israel. Science [Internet] 326:1677–1680. Available from: http://dx.doi.org/10.1126/science.1180695
Alperson-Afil N, Sharon G, Kislev M, Melamed Y, Zohar I, Ashkenazi S, Rabinovich R, Biton R, Werker E, Hartman G, et al. 2009. Spatial Organization of Hominin Activities at Gesher Benot Ya'aqov, Israel. Science [Internet] 326:1677–1680. Available from: http://dx.doi.org/10.1126/science.1180695
Novembre J, and Di Rienzo A. 2009. Spatial patterns of variation due to natural selection in humans. Nature Reviews Genetics [Internet] 10:745–755. Available from: http://dx.doi.org/10.1038/nrg2632
Hill CL. 2009. Stratigraphy and sedimentology at Bir Sahara, Egypt: Environments, climate change and the Middle Paleolithic. CATENA [Internet] 78:250–259. Available from: http://dx.doi.org/10.1016/j.catena.2009.02.003
Balme J, Davidson I, McDonald J, Stern N, and Veth P. 2009. Symbolic behaviour and the peopling of the southern arc route to Australia. Quaternary International 202:59 - 68.
Briggs AW, Good JM, Green RE, Krause J, Maricic T, Stenzel U, Lalueza-Fox C, Rudan P, Brajković D, Kućan Ż, et al. 2009. Targeted Retrieval and Analysis of Five Neandertal mtDNA Genomes. Science [Internet] 325:318–321. Available from: http://dx.doi.org/10.1126/science.1174462
Andrés AM, Hubisz MJ, Indap A, Torgerson DG, Degenhardt JD, Boyko AR, Gutenkunst RN, White TJ, Green ED, Bustamante CD, et al. 2009. Targets of Balancing Selection in the Human Genome. Mol Biol Evol [Internet] 26:2755–2764. Available from: http://dx.doi.org/10.1093/molbev/msp190
Arnheim N, and Calabrese P. 2009. Understanding what determines the frequency and pattern of human germline mutations. Nature Reviews Genetics [Internet] 10:478–488. Available from: http://dx.doi.org/10.1038/nrg2529
van Oven M, and Kayser M. 2009. Updated comprehensive phylogenetic tree of global human mitochondrial DNA variation. Human mutation [Internet] 30. Available from: http://dx.doi.org/10.1002/humu.20921
Chandrasekar A, Kumar S, Sreenath J, Sarkar BN, Urade BP, Mallick S, Bandopadhyay SS, Barua P, Barik SS, Basu D, et al. 2009. Updating Phylogeny of Mitochondrial DNA Macrohaplogroup M in India: Dispersal of Modern Human in South Asian Corridor. PLoS ONE [Internet] 4:e7447+. Available from: http://dx.doi.org/10.1371/journal.pone.0007447
Harmand S. 2009. Variability in Raw Material Selectivity at the Late Pliocene sites of Lokalalei, West Turkana, Kenya. In: Hovers E, Braun DR Interdisciplinary Approaches to the {Oldowan}. Interdisciplinary Approaches to the {Oldowan}. Amsterdam: Springer. p 85–97. Available from: http://dx.doi.org/10.1007/978-1-4020-9060-8\_8
Hattori E, Nakajima M, Yamada K, Iwayama Y, Toyota T, Saitou N, and Yoshikawa T. 2009. Variable number of tandem repeat polymorphisms of DRD4: re-evaluation of selection hypothesis and analysis of association with schizophrenia. European journal of human genetics : EJHG 17:793-801.
Warneken F, and Tomasello M. 2009. Varieties of altruism in children and chimpanzees. Trends in Cognitive Sciences [Internet] 13:397–402. Available from: http://dx.doi.org/10.1016/j.tics.2009.06.008
Loarie SR, Duffy PB, Hamilton H, Asner GP, Field CB, and Ackerly DD. 2009. The Velocity of Climate Change. Nature [Internet] 462:1052–1055. Available from: http://dx.doi.org/10.1038/nature08649
Smith HF. 2009. Which cranial regions reflect molecular distances reliably in humans? Evidence from three-dimensional morphology. Am. J. Hum. Biol. [Internet] 21:36–47. Available from: http://dx.doi.org/10.1002/ajhb.20805
Bailey SE, Weaver TD, and Hublin J-J. 2009. Who made the Aurignacian and other early Upper Paleolithic industries?. Journal of Human Evolution 57:11 - 26.
Gruber T, Muller MN, Strimling P, Wrangham R, and Zuberbühler K. 2009. Wild chimpanzees rely on cultural knowledge to solve an experimental honey acquisition task. Current biology : CB 19:1806-10.
Gruber T, Muller MN, Strimling P, Wrangham R, and Zuberbühler K. 2009. Wild Chimpanzees Rely on Cultural Knowledge to Solve an Experimental Honey Acquisition Task. Current Biology [Internet] 19:1806–1810. Available from: http://dx.doi.org/10.1016/j.cub.2009.08.060
Chiaroni J, Underhill PA, and Cavalli-Sforza LL. 2009. Y chromosome diversity, human expansion, drift, and cultural evolution. Proceedings of the National Academy of Sciences [Internet] 106:20174–20179. Available from: http://dx.doi.org/10.1073/pnas.0910803106
2008
Caramelli D, Milani L, Vai S, Modi A, Pecchioli E, Girardi M, Pilli E, Lari M, Lippi B, Ronchitelli A, et al. 2008. A 28,000 years old Cro-Magnon mtDNA sequence differs from all potentially contaminating modern sequences. PloS one [Internet] 3. Available from: http://dx.doi.org/10.1371/journal.pone.0002700
Whitfield J. 2008. Across the Curious Parallel of Language and Species Evolution. PLoS Biology [Internet] 6. Available from: http://dx.doi.org/10.1371/journal.pbio.0060186
Kawecki TJ. 2008. Adaptation to Marginal Habitats. Annual Review of Ecology, Evolution, and Systematics [Internet] 39:321–342. Available from: http://dx.doi.org/10.1146/annurev.ecolsys.38.091206.095622
Prentis PJ, Wilson JR, Dormontt EE, Richardson DM, and Lowe AJ. 2008. Adaptive evolution in invasive species. Trends in plant science [Internet] 13:288–294. Available from: http://dx.doi.org/10.1016/j.tplants.2008.03.004
da Fonseca RR, Johnson WE, O'Brien SJ, Ramos MJ, and Antunes A. 2008. The adaptive evolution of the mammalian mitochondrial genome. BMC genomics 9:119.
Tian C, Plenge RM, Ransom M, Lee A, Villoslada P, Selmi C, Klareskog L, Pulver AE, Qi L, Gregersen PK, et al. 2008. Analysis and application of European genetic substructure using 300 K SNP information. PLoS genetics [Internet] 4:e4+. Available from: http://dx.doi.org/10.1371/journal.pgen.0040004
Caswell JL, Mallick S, Richter DJ, Neubauer J, Schirmer C, Gnerre S, and Reich D. 2008. Analysis of Chimpanzee History Based on Genome Sequence Alignments. PLoS Genetics [Internet] 4. Available from: http://dx.doi.org/10.1371/journal.pgen.1000057
Trinkaus E, and Shang H. 2008. Anatomical evidence for the antiquity of human footwear: Tianyuan and Sunghir. Journal of Archaeological Science 35:1928 - 1933.
Kondrashov AS. 2008. Another step toward quantifying spontaneous mutation. Proceedings of the National Academy of Sciences [Internet] 105:9133–9134. Available from: http://dx.doi.org/10.1073/pnas.0804749105
McDowell MA, Fryar CD, Ogden CL, and Flegal KM. 2008. Anthropometric Reference Data for Children and Adults: United States, 2003-2006. National Center for Health Statistics. Available from: http://www.cdc.gov/nchs/data/nhsr/nhsr010.pdf
Ohainle M, Kerns J, Li M, Malik H, and Emerman M. 2008. Antiretroelement Activity of APOBEC3H Was Lost Twice in Recent Human Evolution. Cell Host & Microbe [Internet] 4:249–259. Available from: http://dx.doi.org/10.1016/j.chom.2008.07.005
Grodzinsky Y, and Santi A. 2008. The battle for Broca's region. Trends in Cognitive Sciences [Internet] 12:474–480. Available from: http://dx.doi.org/10.1016/j.tics.2008.09.001
Langley MC, Clarkson C, and Ulm S. 2008. Behavioural Complexity in Eurasian Neanderthal Populations: a Chronological Examination of the Archaeological Evidence. Cambridge Archaeological Journal 18:289.
Desilva J, and Lesnik J. 2008. Brain size at birth throughout human evolution: A new method for estimating neonatal brain size in hominins. Journal of Human Evolution [Internet] 55:1064–1074. Available from: http://dx.doi.org/10.1016/j.jhevol.2008.07.008
Sayers K, and Lovejoy OC. 2008. The Chimpanzee Has No Clothes: A Critical Examination of \\emphPan troglodytes in Models of Human Evolution. Current Anthropology [Internet] 49:87–114. Available from: http://dx.doi.org/10.1086/523675
Soares P, Trejaut JA, Loo J-H, Hill C, Mormina M, Lee C-L, Chen Y-M, Hudjashov G, Forster P, Macaulay V, et al. 2008. Climate Change and Postglacial Human Dispersals in Southeast Asia. Molecular Biology and Evolution [Internet] 25:1209–1218. Available from: http://dx.doi.org/10.1093/molbev/msn068
Márquez S, and Laitman JT. 2008. Climatic effects on the nasal complex: a CT imaging, comparative anatomical, and morphometric investigation of Macaca mulatta and Macaca fascicularis. Anat Rec (Hoboken) 291:1420-45.
Rodgers BD, and Garikipati DK. 2008. Clinical, Agricultural, and Evolutionary Biology of Myostatin: A Comparative Review. Endocrine Reviews [Internet] 29:513–534. Available from: http://dx.doi.org/10.1210/er.2008-0003
Weaver TD, Roseman CC, and Stringer CB. 2008. Close correspondence between quantitative- and molecular-genetic divergence times for Neandertals and modern humans. Proceedings of the National Academy of Sciences [Internet] 105:4645–4649. Available from: http://dx.doi.org/10.1073/pnas.0709079105
Richter C, Roa-Quiaoit H, Jantzen C, Al-Zibdah M, and Kochzius M. 2008. Collapse of a New Living Species of Giant Clam in the Red Sea. Current Biology [Internet] 18:1–6. Available from: http://dx.doi.org/10.1016/j.cub.2008.07.060
Green RE, Malaspinas AS, Krause J, Briggs AW, Johnson PL, Uhler C, Meyer M, Good JM, Maricic T, Stenzel U, et al. 2008. A complete neandertal mitochondrial genome sequence determined by high-throughput sequencing. Cell [Internet] 134:416–426. Available from: http://dx.doi.org/10.1016/j.cell.2008.06.021
Gilbert HW. 2008. Conclusions: Evolutionary Insights from the Daka Member. In: Gilbert HW, Asfaw B \\emph{Homo erectus}: {Pleistocene} Evidence from the {Middle Awash}, {Ethiopia}. \\emph{Homo erectus}: {Pleistocene} Evidence from the {Middle Awash}, {Ethiopia}. Berkeley, CA: University of California Press. p 413–425.
Alperson-Afil N. 2008. Continual fire-making by Hominins at Gesher Benot Ya'aqov, Israel. Quaternary Science Reviews [Internet] 27:1733–1739. Available from: http://dx.doi.org/10.1016/j.quascirev.2008.06.009

Pages

About the bibliography

My bibliography database represents years of work by many people. The core of the database was compiled by Milford Wolpoff, with contributions from many students and coauthors. I have added substantially to the database during the last fifteen years, and since I have been blogging all new entries are linked by Digital Object Identifier numbers to their place of publication.

If you find the database useful, please take time to thank the people who worked hard to compile it. I know they will appreciate hearing it.

This database began as a flat text file of bibliographic entries, which I have over the years scripted into a computer-readable format. Many errors have slipped in, including typos from the initial data entry, script fragments from my BibTeX database, and some entries that began in a non-standard format and were scrambled by scripts. Please do not write me expecting that I will fix these errors. It would take me weeks of work to do this. Works will be fixed as I cite them or enter updated information for them.

There are also errors of omission. Most entries are here because they got cited, in Milford's books, in the many research articles by him or his students, or in my work. I mention this mainly because I know that some of you will look up your own names, and find many important papers missing from the database. If you're disappointed in the representation of your articles here, by all means contact me and I will work with you. This database is mirrored on CiteULike and Mendeley and I can import your bibliographic data from these sites, EndNote, BibTeX or other standard formats.

A fuller introduction to the bibliography is in my initial announcement.

Neandertals

For years, I've worked on their bones. Now I'm working on their genes. Read more about the science studying these ancient people.

Denisova

From a finger bone of an ancient human came the record of a completely unexpected population. My lab is working on the science of the Denisova genome.

Acceleration

The advent of agriculture caused natural selection to speed up greatly in humans. We're uncovering some of the ways that populations have rapidly changed during the last 10,000 years.

Malapa

Just outside Johannesburg, the Malapa site is producing some of the most exciting finds in human evolution. This site is the headquarters of the Malapa Soft Tissue Project.