john hawks weblog

paleoanthropology, genetics and evolution

Bibliography

Found 1803 results
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2008
Keegan WF, Fitzpatrick SM, Sealey KS, LeFebvre MJ, and Sinelli PT. 2008. The Role of Small Islands in Marine Subsistence Strategies: Case Studies from the Caribbean. Human Ecology [Internet] 36:635–654. Available from: http://dx.doi.org/10.1007/s10745-008-9188-z
Hamann Y, Ehrmann W, Schmiedl G, Krüger S, Stuut JB, and Kuhnt T. 2008. Sedimentation Processes in the Eastern Mediterranean Sea During the Late Glacial and Holocene Revealed by End-Member Modelling of the Terrigenous Fraction in Marine Sediments. Marine Geology [Internet] 248:97–114. Available from: http://dx.doi.org/10.1016/j.margeo.2007.10.009
Wallace-Wells B. 2008. Surfing the Universe. The New Yorker 84:32–38.
Valdiosera CE, Garc\'ıa-Garitagoitia JL, Garcia N, Doadrio I, Thomas MG, Hänni C, Arsuaga J-L, Barnes I, Hofreiter M, Orlando L, et al. 2008. Surprising Migration and Population Size Dynamics in Ancient Iberian Brown Bears (\\emphUrsus arctos). Proceedings of the National Academy of Sciences, U. S. A. [Internet] 105:5123–5128. Available from: http://dx.doi.org/10.1073/pnas.0712223105
Cox MP, Mendez FL, Karafet TM, Pilkington MM, Kingan SB, Destro-Bisol G, Strassmann BI, and Hammer MF. 2008. Testing for Archaic Hominin Admixture on the X Chromosome: Model Likelihoods for the Modern Human \\emphRRM2P4 Region From Summaries of Genealogical Topology Under the Structured Coalescent. Genetics [Internet] 178:427–437. Available from: http://dx.doi.org/10.1534/genetics.107.080432
Couzin J. 2008. Whole-Genome Data Not Anonymous, Challenging Assumptions. Science [Internet] 321:1278. Available from: http://dx.doi.org/10.1126/science.321.5894.1278
Henn BM, Gignoux C, Lin AA, Oefner PJ, Shen P, Scozzari R, Cruciani F, Tishkoff SA, Mountain JL, and Underhill PA. 2008. Y-Chromosomal Evidence of a Pastoralist Migration through Tanzania to Southern Africa. Proceedings of the National Academy of Sciences, U. S. A. [Internet] 105:10693–10698. Available from: http://dx.doi.org/10.1073/pnas.0801184105
2007
Bouzouggar A, Barton N, Vanhaeren M, D'Errico F, Collcutt S, Higham T, Hodge E, Parfitt S, Rhodes E, Schwenninger J-L, et al. 2007. 82,000-Year-Old Shell Beads from North Africa and Implications for the Origins of Modern Human Behavior. Proceedings of the National Academy of Sciences, U. S. A. [Internet] 104:9964–9969. Available from: http://dx.doi.org/10.1073/pnas.0703877104
Stynder DD, Ackermann RR, and Sealy JC. 2007. Craniofacial Variation and Population Continuity During the South African Holocene. American Journal of Physical Anthropology [Internet] 134:489–500. Available from: http://dx.doi.org/10.1002/ajpa.20696
Suwa G, Asfaw B, Haile-Selassie Y, White T, Katoh S, WoldeGabriel G, Hart WK, Nakaya H, and Beyene Y. 2007. Early Pleistocene \\emphHomo erectus Fossils from Konso, Southern Ethiopia. Anthropological Science [Internet] advance publication. Available from: http://dx.doi.org/10.1537/ase.061203
Scholz CA, Johnson TC, Cohen AS, King JW, Peck JA, Overpeck JT, Talbot MR, Brown ET, Kalindekafe L, Amoako PYO, et al. 2007. East African Megadroughts between 135 and 75 Thousand Years Ago and Bearing on Early-Modern Human Origins. Proceedings of the National Academy of Sciences, U. S. A. [Internet] 104:16416–16421. Available from: http://dx.doi.org/10.1073/pnas.0703874104
Cohen AS, Stone JR, Beuning KRM, Park LE, Reinthal PN, Dettman D, Scholz CA, Johnson TC, King JW, Talbot MR, et al. 2007. Ecological Consequences of Early Late Pleistocene Megadroughts in Tropical Africa. Proceedings of the National Academy of Sciences, U. S. A. [Internet] 104:16422–16427. Available from: http://dx.doi.org/10.1073/pnas.0703873104
Zhao J, Boerwinkle E, and Xiong M. 2007. An Entropy-Based Genome-Wide Transmission/Disequilibrium Test. Human Genetics [Internet] 121:357–367. Available from: http://dx.doi.org/10.1007/s00439-007-0322-6
Sequencing RM, and Consortium A. 2007. Evolutionary and Biomedical Insights from the Rhesus Macaque Genome. Science [Internet] 316:222–234. Available from: http://dx.doi.org/10.1126/science.1139247
Peper JS, Brouwer RM, Boomsma DI, Kahn RS, and {Hulshoff Pol} HE. 2007. Genetic Influences on Human Brain Structure: A Review of Brain Imaging Studies in Twins. Human Brain Mapping [Internet] 28:464–473. Available from: http://dx.doi.org/10.1002/hbm.20398
Rogers J, Kochunov P, Lancaster J, Shelledy W, Glahn D, Blangero J, and Fox P. 2007. Heritability of Brain Volume, Surface Area and Shape: An MRI Study in an Extended Pedigree of Baboons. Human Brain Mapping [Internet] 28:576–583. Available from: http://dx.doi.org/10.1002/hbm.20407
Kristen I, Fuhrmann A, Thorpe J, Röhl U, Wilkes H, and Oberhänsli H. 2007. Hydrological Changes in Southern Africa Over the Last 200 Ka as Recorded in Lake Sediments from the Tswaing Impact Crater. South African Journal of Geology [Internet] 110:311–326. Available from: http://dx.doi.org/10.2113/gssajg.110.2-3.311
Spoor F, Leakey MG, Gathogo PN, Brown FH, Antón SC, McDougall I, Kiarie C, Manthi FK, and Leakey LN. 2007. Implications of New Early \\emphHomo Fossils from Ileret, East of Lake Turkana, Kenya. Nature [Internet] 448:688–671. Available from: http://dx.doi.org/10.1038/nature05986
Huang Y, Clemens SC, Liu W, Wang Y, and Prell WL. 2007. Large-Scale Hydrological Change Drove the Late Miocene C\$\_4\$ Plant Expansion in the Himalayan Foreland and Arabian Peninsula. Geology [Internet] 35:531–534. Available from: http://dx.doi.org/10.1130/G23666A.1
Umer M, Lamb HF, Bonnefille R, Lézine AM, Tiercelin JJ, Gibert E, Cazet JP, and Watrin J. 2007. Late Pleistocene and Holocene Vegetation History of the Bale Mountains, Ethiopia. Quaternary Science Reviews [Internet] 26:2229–2246. Available from: http://dx.doi.org/10.1016/j.quascirev.2007.05.004
Lamb HF, Bates RC, Coombes PV, Marsahll MH, Umer M, Davies SJ, and Dejen E. 2007. Late Pleistocene Desiccation of Lake Tana, Source of the Blue Nile. Quaternary Science Reviews [Internet] 26:287–299. Available from: http://dx.doi.org/10.1016/j.quascirev.2006.11.020
Xing J, Witherspoon DJ, Ray DA, Batzer MA, and Jorde LB. 2007. Mobile DNA Elements in Primate and Human Evolution. Yearbook of Physical Anthropology [Internet] 50:2–19. Available from: http://dx.doi.org/10.1002/ajpa.20722
Aldenderfer MS. 2007. Modeling the Neolithic on the Tibetan Plateau. Developments in Quaternary Science [Internet] 9:151–165. Available from: http://dx.doi.org/10.1016/S1571-0866(07)09011-2
Mosher DS, Quignon P, Bustamante CD, Sutter NB, Mellersh CS, Parker HG, and Ostrander EA. 2007. A Mutation in the Myostatin Gene Increases Muscle Mass and Enhances Racing Performance in Heterozygote Dogs. PLoS Genetics [Internet] 3. Available from: http://dx.doi.org/10.1371/journal.pgen.0030079
Krause J, Orlando L, Serre D, Viola B, Prüfer K, Richards MP, Hublin J-J, Hänni C, Derevianko AP, and Pääbo S. 2007. Neanderthals in Central Asia and Siberia. Nature [Internet] 449:902–904. Available from: http://dx.doi.org/10.1038/nature06193
Bernor RL. 2007. New Apes Fill the Gap. Proceedings of the National Academy of Sciences, U. S. A. [Internet] 104:19661–19662. Available from: http://dx.doi.org/10.1073/pnas.0710109105
Becquet C, and Przeworski M. 2007. A New Approach to Estimate Parameters of Speciation Models with Application to Apes. Genome Research [Internet] 17:1505–1519. Available from: http://dx.doi.org/10.1101/gr.6409707
Kunimatsu Y, Nakatsukasa M, Sawada Y, Sakai T, Hyodo M, Hyodo H, Itaya T, Nakaya H, Saegusa H, Mazurier A, et al. 2007. A New Late Miocene Great Ape from Kenya and Its Implications for the Origins of African Great Apes and Humans. Proceedings of the National Academy of Sciences, U. S. A. [Internet] 104:19220–19225. Available from: http://dx.doi.org/10.1073/pnas.0706190104
Suwa G, Kono RT, Katoh S, Asfaw B, and Beyene Y. 2007. A New Species of Great Ape from the Late Miocene Epoch in Ethiopia. Nature [Internet] 448:921–924. Available from: http://dx.doi.org/10.1038/nature06113
Lieberman DE. 2007. Palaeoanthropology: Homing in on Early \\emphHomo. Nature [Internet] 449:291–292. Available from: http://dx.doi.org/10.1038/449291a
Lordkipanidze D, Jashashvili T, Vekua A, de León MS, Zollikofer CPE, Rightmire PG, Pontzer H, Ferring R, Oms O, Tappen M, et al. 2007. Postcranial Evidence from Early \\emphHomo from Dmanisi, Georgia. Nature [Internet] 449:305–310. Available from: http://dx.doi.org/10.1038/nature06134
Hawks J, Wang ET, Cochran G, Harpending HC, and Moyzis RK. 2007. Recent acceleration of human adaptive evolution. Proceedings of the National Academy of Sciences, U. S. A. [Internet] 104:20753–20758. Available from: http://dx.doi.org/10.1073/pnas.0707650104
Tenesa A, Navarro P, Hayes BJ, Duffy DL, Clarke GM, Goddard ME, and Visscher PM. 2007. Recent Human Effective Population Size Estimated From Linkage Disequilibrium. Genome Research [Internet] 17:520–526. Available from: http://dx.doi.org/10.1101/gr.6023607
Hernandez-Aguilar AR, Moore J, and Pickering TR. 2007. Savanna Chimpanzees Use Tools to Harvest the Underground Storage Organs of Plants. Proceedings of the National Academy of Sciences, U. S. A. [Internet] 104:19210–19213. Available from: http://dx.doi.org/10.1073/pnas.0707929104
Hoggart CJ, Chadeau-Hyam M, Clark TG, Lampariello R, Whittaker JC, {De Iorio} M, and Balding DJ. 2007. Sequence-Level Population Simulations Over Large Genomic Regions. Genetics [Internet] 177:1725–1731. Available from: http://dx.doi.org/10.1534/genetics.106.069088
Duffy DL, Montgomery GW, Chen W, Zhao ZZ, Le L, James MR, Hayward NK, Martin NG, and Sturm RA. 2007. A Three Single-Nucleotide Polymorphism Haplotype in Intron 1 of \\emphOCA2 Explains Most Human Eye-Color Variation. American Journal of Human Genetics [Internet] 80:241–252. Available from: http://dx.doi.org/10.1086/510885
Nielsen J. 2007. Write Articles, Not Blog Postings. [Internet]. Available from: http://www.useit.com/alertbox/articles-not-blogs.html
2006
Ely B, Wilson JL, Jackson F, and Jackson BA. 2006. African-American Mitochondrial DNAs Often Match mtDNAs Found in Multiple African Ethnic Groups. BMC Biology [Internet] 4:34. Available from: http://dx.doi.org/10.1186/1741-7007-4-34
Mellars P. 2006. Archaeology and the Dispersal of Modern Humans in Europe: Deconstructing the ``Aurignacian''. Evolutionary Anthropology [Internet] 15:167–182. Available from: http://dx.doi.org/10.1002/evan.20103
White TD, WoldeGabriel G, Asfaw B, Ambrose S, Beyene Y, Bernor RL, Boisserie J-R, Currie B, Gilbert H, Haile-Selassie Y, et al. 2006. Asa Issie, Aramis and the Origin of Australopithecus. Nature [Internet] 440:883–889. Available from: http://dx.doi.org/10.1038/nature04629
Pfeiffer S, and Sealy J. 2006. Body Size Among Holocene Foragers of the Cape Ecozone, Southern Africa. American Journal of Physical Anthropology [Internet] 129:1–11. Available from: http://dx.doi.org/10.1002/ajpa.20231
Fischer A, Pollack J, Thalmann O, Nickel B, and Pääbo S. 2006. Demographic History and Genetic Differentiation in Apes. Current Biology [Internet] 16:1133–1138. Available from: http://dx.doi.org/10.1016/j.cub.2006.04.033
Merceron G, Taylor S, Scott R, Chaimanee Y, and Jaeger J-J. 2006. Dietary Characterization of the Hominoid \\emphKhoratpithecus (Miocene of Thailand): Evidence from Dental Topographic and Microwear Texture Analyses. Naturwissenschaften [Internet] 93:329–333. Available from: http://dx.doi.org/10.1007/s00114-006-0107-0
von der Heydt A, and Dijkstra HA. 2006. Effect of Ocean Gateways on the Global Ocean Circulation in the Late Oligocene and Early Miocene. 21 [Internet]. Available from: http://dx.doi.org/10.1029/2005PA001149
Chaimanee Y, Yamee C, Tian P, Khaowiset K, Marandat B, Tafforeau P, Nemoz C, and Jaeger J-J. 2006. \\emphKhoratpithecus piriyai, A Late Miocene Hominoid of Thailand. American Journal of Physical Anthropology [Internet] 131:311–323. Available from: http://dx.doi.org/10.1002/ajpa.20437
Dawy Z, Goebel B, Hagenauer J, Andreoli C, Meitinger T, and Mueller JC. 2006. Gene Mapping and Marker Clustering Using Shannon's Mutual Information. IEEE/ACM Transactions on Computational Biology and Bioinformatics [Internet] 3:47–56. Available from: http://dx.doi.org/10.1109/TCBB.2006.9
Hoekstra HE. 2006. Genetics, Development and Evolution of Adaptive Pigmentation in Vertebrates. Heredity [Internet] 97:222–234. Available from: http://dx.doi.org/10.1038/sj.hdy.6800861
Meijaard E, and Groves CP. 2006. The Geography of Mammals and Rivers in Mainland Southeast Asia. In: Lehman SM, Fleagle JG Primate Biogeography. Primate Biogeography. New York: Springer. p 305–329.
Sommer RS, and Nadachowski A. 2006. Glacial Refugia of Mammals in Europe: Evidence from Fossil Records. Mammal Review [Internet] 36:251–265. Available from: http://dx.doi.org/10.1111/j.1365-2907.2006.00093.x
McHenry HM, and Jones AL. 2006. Hallucial Convergence in Early Hominids. Journal of Human Evolution [Internet] 50:534–539. Available from: http://dx.doi.org/10.1016/j.jhevol.2005.12.008

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About the bibliography

My bibliography database represents years of work by many people. The core of the database was compiled by Milford Wolpoff, with contributions from many students and coauthors. I have added substantially to the database during the last fifteen years, and since I have been blogging all new entries are linked by Digital Object Identifier numbers to their place of publication.

If you find the database useful, please take time to thank the people who worked hard to compile it. I know they will appreciate hearing it.

This database began as a flat text file of bibliographic entries, which I have over the years scripted into a computer-readable format. Many errors have slipped in, including typos from the initial data entry, script fragments from my BibTeX database, and some entries that began in a non-standard format and were scrambled by scripts. Please do not write me expecting that I will fix these errors. It would take me weeks of work to do this. Works will be fixed as I cite them or enter updated information for them.

There are also errors of omission. Most entries are here because they got cited, in Milford's books, in the many research articles by him or his students, or in my work. I mention this mainly because I know that some of you will look up your own names, and find many important papers missing from the database. If you're disappointed in the representation of your articles here, by all means contact me and I will work with you. This database is mirrored on CiteULike and Mendeley and I can import your bibliographic data from these sites, EndNote, BibTeX or other standard formats.

A fuller introduction to the bibliography is in my initial announcement.

Neandertals

For years, I've worked on their bones. Now I'm working on their genes. Read more about the science studying these ancient people.

Denisova

From a finger bone of an ancient human came the record of a completely unexpected population. My lab is working on the science of the Denisova genome.

Acceleration

The advent of agriculture caused natural selection to speed up greatly in humans. We're uncovering some of the ways that populations have rapidly changed during the last 10,000 years.

Malapa

Just outside Johannesburg, the Malapa site is producing some of the most exciting finds in human evolution. This site is the headquarters of the Malapa Soft Tissue Project.