john hawks weblog

paleoanthropology, genetics and evolution

Bibliography

Found 12836 results
2010
Maxwell TA, Issawi B, and Haynes VC. 2010. Evidence for Pleistocene lakes in the Tushka region, south Egypt. Geology [Internet] 38:1135–1138. Available from: http://dx.doi.org/10.1130/G31320.1
McPherron SP, Alemseged Z, Marean CW, Wynn JG, Reed D, Geraads D, Bobe R, and Bearat HA. 2010. Evidence for stone-tool-assisted consumption of animal tissues before 3.39 million years ago at Dikika, Ethiopia. Nature [Internet] 466:857–860. Available from: http://dx.doi.org/10.1038/nature09248
Curnoe D, and Brink J. 2010. Evidence of pathological conditions in the Florisbad cranium. Journal of Human Evolution [Internet] 59:504–513. Available from: http://dx.doi.org/10.1016/j.jhevol.2010.06.003
Li C, Li H, Cui Y, Xie C, Cai D, Li W, Mair V, Xu Z, Zhang QC, Abuduresule I, et al. 2010. Evidence that a West-East admixed population lived in the Tarim Basin as early as the early Bronze Age. BMC Biology [Internet] 8:15+. Available from: http://dx.doi.org/10.1186/1741-7007-8-15
Amos W, and Hoffman JI. 2010. Evidence that two main bottleneck events shaped modern human genetic diversity. Proceedings of the Royal Society B: Biological Sciences [Internet] 277:131–137. Available from: http://dx.doi.org/10.1098/rspb.2009.1473
Carvalho CM, Zhang F, and Lupski JR. 2010. Evolution in health and medicine Sackler colloquium: Genomic disorders: a window into human gene and genome evolution. Proceedings of the National Academy of Sciences of the United States of America [Internet] 107 Suppl 1:1765–1771. Available from: http://dx.doi.org/10.1073/pnas.0906222107
Nowak MA, Tarnita CE, and Wilson EO. 2010. The evolution of eusociality. Nature [Internet] 466:1057–1062. Available from: http://dx.doi.org/10.1038/nature09205
Zollikofer CPE, and Ponce de León MS. 2010. The evolution of hominin ontogenies. Seminars in Cell & Developmental Biology 21:441 - 452.
Campbell MC, and Tishkoff SA. 2010. The evolution of human genetic and phenotypic variation in Africa. Current biology : CB [Internet] 20:R166–R173. Available from: http://dx.doi.org/10.1016/j.cub.2009.11.050
Botero CA, Pen I, Komdeur J, and Weissing FJ. 2010. THE EVOLUTION OF INDIVIDUAL VARIATION IN COMMUNICATION STRATEGIES. Evolution [Internet] 64:3123–3133. Available from: http://dx.doi.org/10.1111/j.1558-5646.2010.01065.x
Harvati K, Hublin J-J, and Gunz P. 2010. Evolution of middle-late Pleistocene human cranio-facial form: A 3-D approach. Journal of Human Evolution [Internet]. Available from: http://dx.doi.org/10.1016/j.jhevol.2010.06.005
Lynch M. 2010. Evolution of the mutation rate. Trends in Genetics [Internet] 26:345–352. Available from: http://dx.doi.org/10.1016/j.tig.2010.05.003
Gorlov I, Gorlova O, Frazier M, Spitz M, and Amos C. 2010. Evolutionary evidence of the effect of rare variants on disease etiology. Clinical Genetics [Internet]:no. Available from: http://dx.doi.org/10.1111/j.1399-0004.2010.01535.x
Leonard WR, Stock JT, and Valeggia CR. 2010. Evolutionary perspectives on human diet and nutrition. Evolutionary Anthropology: Issues, News, and Reviews [Internet] 19:85–86. Available from: http://dx.doi.org/10.1002/evan.20250
Ochman H, Worobey M, Kuo C-H, Ndjango J-BN, Peeters M, Hahn BH, and Hugenholtz P. 2010. Evolutionary Relationships of Wild Hominids Recapitulated by Gut Microbial Communities. PLoS Biol [Internet] 8:e1000546+. Available from: http://dx.doi.org/10.1371/journal.pbio.1000546
Sezgin E, Drosdak A, McIntosh C, Kessing B, Lautenberger JA, Goedert JJ, Phair JP, Troyer JL, Smith MW, and O'Brien SJ. 2010. Examination of disease-based selection, demographic history and population structure in European Y-chromosome haplogroup I. Journal of Human Genetics [Internet] 55:613–620. Available from: http://dx.doi.org/10.1038/jhg.2010.77
Dunfield K, Kuhlmeier VA, O'Connell L, and Kelley E. 2010. Examining the Diversity of Prosocial Behavior: Helping, Sharing, and Comforting in Infancy. Infancy [Internet]:no. Available from: http://dx.doi.org/10.1111/j.1532-7078.2010.00041.x
Johansen CT, Wang J, Lanktree MB, Cao H, McIntyre AD, Ban MR, Martins RA, Kennedy BA, Hassell RG, Visser ME, et al. 2010. Excess of rare variants in genes identified by genome-wide association study of hypertriglyceridemia. Nature genetics [Internet] 42:684–687. Available from: http://dx.doi.org/10.1038/ng.628
Hiwatashi T, Okabe Y, Tsutsui T, and Hiramatsu C. 2010. An Explicit Signature of Balancing Selection for Color-Vision Variation in New World Monkeys. Molecular Biology and Evolution 27:453 - 464.
Corona E, Dudley JT, and Butte AJ. 2010. Extreme evolutionary disparities seen in positive selection across seven complex diseases. PloS one 5:e12236.
Chevin L-M, Martin G, and Lenormand T. 2010. FISHER'S MODEL AND THE GENOMICS OF ADAPTATION: RESTRICTED PLEIOTROPY, HETEROGENOUS MUTATION, AND PARALLEL EVOLUTION. Evolution [Internet] 64:3213–3231. Available from: http://dx.doi.org/10.1111/j.1558-5646.2010.01058.x
Avise JC. 2010. Footprints of nonsentient design inside the human genome. Proceedings of the National Academy of Sciences [Internet] 107:8969–8976. Available from: http://dx.doi.org/10.1073/pnas.0914609107
Ségurel L, Lafosse S, Heyer E, and Vitalis R. 2010. Frequency of the AGT Pro11Leu Polymorphism in Humans: does Diet Matter?. Annals of Human Genetics 74:57 - 64.
Goecks J, Nekrutenko A, Taylor J, and Team TG. 2010. Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences. Genome Biology [Internet] 11:R86+. Available from: http://dx.doi.org/10.1186/gb-2010-11-8-r86
Hoffmann FG, Opazo JC, and Storz JF. 2010. Gene cooption and convergent evolution of oxygen transport hemoglobins in jawed and jawless vertebrates. Proceedings of the National Academy of Sciences of the United States of America 107:14274-9.
Wilkens H. 2010. Genes, modules and the evolution of cave fish. Heredity [Internet] 105:413–422. Available from: http://dx.doi.org/10.1038/hdy.2009.184
O'Dushlaine C, McQuillan R, Weale ME, Crouch DJM, Johansson A, Aulchenko Y, Franklin CS, Polasek O, Fuchsberger C, Corvin A, et al. 2010. Genes predict village of origin in rural Europe. European Journal of Human Genetics [Internet] 18:1269–1270. Available from: http://dx.doi.org/10.1038/ejhg.2010.92
Melchior L, Lynnerup N, Siegismund HR, Kivisild T, and Dissing J. 2010. Genetic Diversity among Ancient Nordic Populations. PLoS ONE [Internet] 5:e11898+. Available from: http://dx.doi.org/10.1371/journal.pone.0011898
Xing J, Watkins SW, Hu Y, Huff C, Sabo A, Muzny D, Bamshad M, Gibbs R, Jorde L, and Yu F. 2010. Genetic diversity in India and the inference of Eurasian population expansion. Genome Biology [Internet] 11:R113+. Available from: http://dx.doi.org/10.1186/gb-2010-11-11-r113
Simonson TS, Yang Y, Huff CD, Yun H, Qin G, Witherspoon DJ, Bai Z, Lorenzo FR, Xing J, Jorde LB, et al. 2010. Genetic Evidence for High-Altitude Adaptation in Tibet. Science [Internet] 329:72–75. Available from: http://dx.doi.org/10.1126/science.1189406
McClellan J, and King M-C. 2010. Genetic heterogeneity in human disease. Cell 141:210-7.
Reich D, Green RE, Kircher M, Krause J, Patterson N, Durand EY, Viola B, Briggs AW, Stenzel U, Johnson PLF, et al. 2010. Genetic history of an archaic hominin group from Denisova Cave in Siberia. Nature [Internet] 468:1053–1060. Available from: http://dx.doi.org/10.1038/nature09710
Pritchard JK, Pickrell JK, and Coop G. 2010. The Genetics of Human Adaptation: Hard Sweeps, Soft Sweeps, and Polygenic Adaptation. Current Biology [Internet] 20:R208–R215. Available from: http://dx.doi.org/10.1016/j.cub.2009.11.055
Burke MK, Dunham JP, Shahrestani P, Thornton KR, Rose MR, and Long AD. 2010. Genome-wide analysis of a long-term evolution experiment with Drosophila. Nature [Internet] 467:587–590. Available from: http://dx.doi.org/10.1038/nature09352
Huyghe JR, Fransen E, Hannula S, Van Laer L, Van Eyken E, Maki-Torkko E, Aikio P, Sorri M, Huentelman MJ, and Camp GV. 2010. A genome-wide analysis of population structure in the Finnish Saami with implications for genetic association studies. European Journal of Human Genetics [Internet] aop. Available from: http://dx.doi.org/10.1038/ejhg.2010.179
Feero GW, Guttmacher AE, and Manolio TA. 2010. Genomewide Association Studies and Assessment of the Risk of Disease. New England Journal of Medicine [Internet] 363:166–176. Available from: http://dx.doi.org/10.1056/NEJMra0905980
Rosenberg NA, Huang L, Jewett EM, Szpiech ZA, Jankovic I, and Boehnke M. 2010. Genome-wide association studies in diverse populations. Nature Reviews Genetics [Internet] 11:356–366. Available from: http://dx.doi.org/10.1038/nrg2760
Docherty SJ, Davis OSP, Kovas Y, Meaburn EL, Dale PS, Petrill SA, Schalkwyk LC, and Plomin R. 2010. A genome-wide association study identifies multiple loci associated with mathematics ability and disability. Genes, Brain and Behavior [Internet] 9:234–247. Available from: http://dx.doi.org/10.1111/j.1601-183X.2009.00553.x
Verweij KJH, Zietsch BP, Medland SE, Gordon SD, Benyamin B, Nyholt DR, McEvoy BP, Sullivan PF, Heath AC, and Madden PAF. 2010. A genome-wide association study of Cloninger's temperament scales: Implications for the evolutionary genetics of personality. Biological Psychology [Internet] 85:306–317. Available from: http://dx.doi.org/10.1016/j.biopsycho.2010.07.018
Anney R, Klei L, Pinto D, Regan R, Conroy J, Magalhaes TR, Correia C, Abrahams BS, Sykes N, Pagnamenta AT, et al. 2010. A genome-wide scan for common alleles affecting risk for autism. Human Molecular Genetics [Internet] 19:4072–4082. Available from: http://dx.doi.org/10.1093/hmg/ddq307
Behar DM, Yunusbayev B, Metspalu M, Metspalu E, Rosset S, Parik J, Rootsi S, Chaubey G, Kutuev I, Yudkovsky G, et al. 2010. The genome-wide structure of the Jewish people. Nature [Internet] 466:238–242. Available from: http://dx.doi.org/10.1038/nature09103
McClellan J, and King M-C. 2010. Genomic analysis of mental illness: a changing landscape. JAMA : the journal of the American Medical Association 303:2523-4.
Hodgkinson A, and Eyre-Walker A. 2010. The Genomic Distribution and Local Context of Coincident SNPs in Human and Chimpanzee. Genome Biology and Evolution [Internet] 2:547–557. Available from: http://dx.doi.org/10.1093/gbe/evq039
Rohland N, Reich D, Mallick S, Meyer M, Green RE, Georgiadis NJ, Roca AL, and Hofreiter M. 2010. Genomic DNA Sequences from Mastodon and Woolly Mammoth Reveal Deep Speciation of Forest and Savanna Elephants. PLoS Biol [Internet] 8:e1000564+. Available from: http://dx.doi.org/10.1371/journal.pbio.1000564
White D, and Rabago-Smith M. 2010. Genotype–phenotype associations and human eye color. Journal of Human Genetics [Internet] 56:5–7. Available from: http://dx.doi.org/10.1038/jhg.2010.126
Svendsen JI, Heggen HP, Hufthammer AK, Mangerud J, Pavlov P, and Roebroeks W. 2010. Geo-archaeological investigations of Palaeolithic sites along the Ural Mountains – On the northern presence of humans during the last Ice Age. Quaternary Science Reviews [Internet]. Available from: http://dx.doi.org/10.1016/j.quascirev.2010.06.043
Piel FB, Patil AP, Howes RE, Nyangiri OA, Gething PW, Williams TN, Weatherall DJ, and Hay SI. 2010. Global distribution of the sickle cell gene and geographical confirmation of the malaria hypothesis. Nature Communications [Internet] 1:104+. Available from: http://dx.doi.org/10.1038/ncomms1104
Zhong H, Shi H, Qi X-BB, Xiao C-JJ, Jin L, Ma RZ, and Su B. 2010. Global distribution of Y-chromosome haplogroup C reveals the prehistoric migration routes of African exodus and early settlement in East Asia. Journal of human genetics [Internet] 55:428–435. Available from: http://dx.doi.org/10.1038/jhg.2010.40
Claw KG, Tito RY, Stone AC, and Verrelli BC. 2010. Haplotype structure and divergence at human and chimpanzee serotonin transporter and receptor genes: implications for behavioral disorder association analyses. Molecular biology and evolution 27:1518-29.
Malmstrom H, Linderholm A, Liden K, Stora J, Molnar P, Holmlund G, Jakobsson M, and Gotherstrom A. 2010. High frequency of lactose intolerance in a prehistoric hunter-gatherer population in northern Europe. BMC Evolutionary Biology [Internet] 10:89+. Available from: http://dx.doi.org/10.1186/1471-2148-10-89

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About the bibliography

My bibliography database represents years of work by many people. The core of the database was compiled by Milford Wolpoff, with contributions from many students and coauthors. I have added substantially to the database during the last fifteen years, and since I have been blogging all new entries are linked by Digital Object Identifier numbers to their place of publication.

If you find the database useful, please take time to thank the people who worked hard to compile it. I know they will appreciate hearing it.

This database began as a flat text file of bibliographic entries, which I have over the years scripted into a computer-readable format. Many errors have slipped in, including typos from the initial data entry, script fragments from my BibTeX database, and some entries that began in a non-standard format and were scrambled by scripts. Please do not write me expecting that I will fix these errors. It would take me weeks of work to do this. Works will be fixed as I cite them or enter updated information for them.

There are also errors of omission. Most entries are here because they got cited, in Milford's books, in the many research articles by him or his students, or in my work. I mention this mainly because I know that some of you will look up your own names, and find many important papers missing from the database. If you're disappointed in the representation of your articles here, by all means contact me and I will work with you. This database is mirrored on CiteULike and Mendeley and I can import your bibliographic data from these sites, EndNote, BibTeX or other standard formats.

A fuller introduction to the bibliography is in my initial announcement.

Neandertals

For years, I've worked on their bones. Now I'm working on their genes. Read more about the science studying these ancient people.

Denisova

From a finger bone of an ancient human came the record of a completely unexpected population. My lab is working on the science of the Denisova genome.

Acceleration

The advent of agriculture caused natural selection to speed up greatly in humans. We're uncovering some of the ways that populations have rapidly changed during the last 10,000 years.

Malapa

Just outside Johannesburg, the Malapa site is producing some of the most exciting finds in human evolution. This site is the headquarters of the Malapa Soft Tissue Project.