john hawks weblog

paleoanthropology, genetics and evolution

Bibliography

Found 12400 results
In Press
Hockett B. In Press. The consequences of Middle Paleolithic diets on pregnant Neanderthal women. [Internet]: - . Available from: http://www.sciencedirect.com/science/article/pii/S1040618211003776
2012
Clarke L, Zheng-Bradley X, Smith R, Kulesha E, Xiao C, Toneva I, Vaughan B, Preuss D, Leinonen R, Shumway M, et al. 2012. The 1000 Genomes Project: data management and community access. Nature methods 9:459-462.
Haber M, Platt DE, Ashrafian Bonab M, Youhanna SC, Soria-Hernanz DF, Martínez-Cruz B, Douaihy B, Ghassibe-Sabbagh M, Rafatpanah H, Ghanbari M, et al. 2012. Afghanistan's Ethnic Groups Share a Y-Chromosomal Heritage Structured by Historical Events. PloS one 7:e34288.
Rule S, Brook BW, Haberle SG, Turney CSM, Kershaw PA, and Johnson CN. 2012. The Aftermath of Megafaunal Extinction: Ecosystem Transformation in Pleistocene Australia. Science (New York, N.Y.) 335:1483-1486.
Burbano HA, Green RE, Maricic T, Lalueza-Fox C, de la Rasilla M, Rosas A, Kelso J, Pollard KS, Lachmann M, Pääbo S, et al. 2012. Analysis of human accelerated DNA regions using archaic hominin genomes. PloS one 7:e32877.
Yang MA, Malaspinas A-S, Durand EY, and Slatkin M. 2012. Ancient structure in Africa unlikely to explain Neanderthal and non-African genetic similarity. Molecular biology and evolution.
Smith ME, Feinman GM, Drennan RD, Earle T, and Morris I. 2012. Archaeology as a social science. Proceedings of the National Academy of Sciences of the United States of America.
Hardus ME, Lameira AR, Zulfa A, Atmoko SUS, Vries H, and Wich SA. 2012. Behavioral, Ecological, and Evolutionary Aspects of Meat-Eating by Sumatran Orangutans (Pongo abelii). International Journal of Primatology.
Bliven S, and Prlić A. 2012. Circular Permutation in Proteins. PLoS Computational Biology 8:e1002445.
Perry GH, Melsted P, Marioni JC, Wang Y, Bainer R, Pickrell JK, Michelini K, Zehr S, Yoder AD, Stephens M, et al. 2012. Comparative RNA sequencing reveals substantial genetic variation in endangered primates. Genome research 22:602-10.
Fu Q, Rudan P, Pääbo S, and Krause J. 2012. Complete mitochondrial genomes reveal Neolithic expansion into Europe. PloS one 7:e32473.
Behar  M, van Oven M, Rosset S, Metspalu M, Loogväli E-L, Silva  M, Kivisild T, Torroni A, and Villems R. 2012. A “Copernican” Reassessment of the Human Mitochondrial DNA Tree from its Root. The American Journal of Human Genetics 90:675 - 684.
Nakagome S, Mano S, Kozlowski L, Bujnicki JM, Shibata H, Fukumaki Y, Kidd JR, Kidd KK, Kawamura S, Oota H, et al. 2012. Crohn's disease risk alleles on the NOD2 locus have been maintained by natural selection on standing variation. Molecular biology and evolution.
Begley GC, and Ellis LM. 2012. Drug development: Raise standards for preclinical cancer research. Nature 483:531-3.
De Mita S, and Siol M. 2012. EggLib: processing, analysis and simulation tools for population genetics and genomics. BMC genetics 13:27.
Li S, and Jakobsson M. 2012. Estimating demographic parameters from large-scale population genomic data using Approximate Bayesian Computation. BMC genetics 13:22.
Steiper ME, and Seiffert ER. 2012. Evidence for a convergent slowdown in primate molecular rates and its implications for the timing of early primate evolution. Proceedings of the National Academy of Sciences of the United States of America 109:6006-11.
Israde-Alcántara I, Bischoff JL, Domínguez-Vázquez G, Li H-C, Decarli PS, Bunch TE, Wittke JH, Weaver JC, Firestone RB, West A, et al. 2012. Evidence from central Mexico supporting the Younger Dryas extraterrestrial impact hypothesis. Proceedings of the National Academy of Sciences of the United States of America.
Dennis  Y, Nuttle X, Sudmant  H, Antonacci F, Graves  A, Nefedov M, Rosenfeld  A, Sajjadian S, Malig M, Kotkiewicz H, et al. 2012. Evolution of Human-Specific Neural SRGAP2 Genes by Incomplete Segmental Duplication. Cell.
Stringer C. 2012. Evolution: What makes a modern human. Nature 485:33 - 35.
Lewton KL. 2012. Evolvability of the Primate Pelvic Girdle. Evolutionary Biology 39:126 - 139.
Liu X, Somel M, Tang L, Yan Z, Jiang X, Guo S, Yuan Y, He L, Oleksiak A, Zhang Y, et al. 2012. Extension of cortical synaptic development distinguishes humans from chimpanzees and macaques. Genome Research.
Liu X, Somel M, Tang L, Yan Z, Jiang X, Guo S, Yuan Y, He L, Oleksiak A, Zhang Y, et al. 2012. Extension of cortical synaptic development distinguishes humans from chimpanzees and macaques. Genome research 22:611-22.
Jack RE, Garrod OGB, Yu H, Caldara R, and Schyns PG. 2012. Facial expressions of emotion are not culturally universal. Proceedings of the National Academy of Sciences of the United States of America.
Auton A, Fledel-Alon A, Pfeifer S, Venn O, Ségurel L, Street T, Leffler EM, Bowden R, Aneas I, Broxholme J, et al. 2012. A fine-scale chimpanzee genetic map from population sequencing. Science (New York, N.Y.) 336:193-8.

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About the bibliography

My bibliography database represents years of work by many people. The core of the database was compiled by Milford Wolpoff, with contributions from many students and coauthors. I have added substantially to the database during the last fifteen years, and since I have been blogging all new entries are linked by Digital Object Identifier numbers to their place of publication.

If you find the database useful, please take time to thank the people who worked hard to compile it. I know they will appreciate hearing it.

This database began as a flat text file of bibliographic entries, which I have over the years scripted into a computer-readable format. Many errors have slipped in, including typos from the initial data entry, script fragments from my BibTeX database, and some entries that began in a non-standard format and were scrambled by scripts. Please do not write me expecting that I will fix these errors. It would take me weeks of work to do this. Works will be fixed as I cite them or enter updated information for them.

There are also errors of omission. Most entries are here because they got cited, in Milford's books, in the many research articles by him or his students, or in my work. I mention this mainly because I know that some of you will look up your own names, and find many important papers missing from the database. If you're disappointed in the representation of your articles here, by all means contact me and I will work with you. This database is mirrored on CiteULike and Mendeley and I can import your bibliographic data from these sites, EndNote, BibTeX or other standard formats.

A fuller introduction to the bibliography is in my initial announcement.

Neandertals

For years, I've worked on their bones. Now I'm working on their genes. Read more about the science studying these ancient people.

Denisova

From a finger bone of an ancient human came the record of a completely unexpected population. My lab is working on the science of the Denisova genome.

Acceleration

The advent of agriculture caused natural selection to speed up greatly in humans. We're uncovering some of the ways that populations have rapidly changed during the last 10,000 years.

Malapa

Just outside Johannesburg, the Malapa site is producing some of the most exciting finds in human evolution. This site is the headquarters of the Malapa Soft Tissue Project.